%FILES%
etc/
etc/tRNAscan-SE.conf
usr/
usr/bin/
usr/bin/EukHighConfidenceFilter
usr/bin/MitoHighConfidenceFilter
usr/bin/covels-SE
usr/bin/coves-SE
usr/bin/eufindtRNA
usr/bin/fasta2gsi
usr/bin/sstofa
usr/bin/tRNAscan-SE
usr/bin/trnascan-1.4
usr/include/
usr/include/trnascan-se/
usr/include/trnascan-se/dbmalloc.h
usr/include/trnascan-se/eufind_const.h
usr/include/trnascan-se/funcs.h
usr/include/trnascan-se/gnuregex.h
usr/include/trnascan-se/maspar.h
usr/include/trnascan-se/pavesi.h
usr/include/trnascan-se/prior.h
usr/include/trnascan-se/sqfuncs.h
usr/include/trnascan-se/squid.h
usr/include/trnascan-se/structs.h
usr/include/trnascan-se/version.h
usr/share/
usr/share/trnascan-se/
usr/share/trnascan-se/gcode/
usr/share/trnascan-se/gcode/gcode.cilnuc
usr/share/trnascan-se/gcode/gcode.echdmito
usr/share/trnascan-se/gcode/gcode.invmito
usr/share/trnascan-se/gcode/gcode.marsumito
usr/share/trnascan-se/gcode/gcode.othmito
usr/share/trnascan-se/gcode/gcode.vertmito
usr/share/trnascan-se/gcode/gcode.ystmito
usr/share/trnascan-se/models/
usr/share/trnascan-se/models/Cren-eury-BHB-noncan.cm
usr/share/trnascan-se/models/Dsignal
usr/share/trnascan-se/models/ESELC.cm
usr/share/trnascan-se/models/PSELC.cm
usr/share/trnascan-se/models/TPCsignal
usr/share/trnascan-se/models/TRNA2-arch.cm
usr/share/trnascan-se/models/TRNA2-archns.cm
usr/share/trnascan-se/models/TRNA2-bact.cm
usr/share/trnascan-se/models/TRNA2-bactns.cm
usr/share/trnascan-se/models/TRNA2-euk.cm
usr/share/trnascan-se/models/TRNA2-eukns.cm
usr/share/trnascan-se/models/TRNA2.cm
usr/share/trnascan-se/models/TRNA2ns.cm
usr/share/trnascan-se/models/TRNAinf-1415-ns.cm
usr/share/trnascan-se/models/TRNAinf-1415.cm
usr/share/trnascan-se/models/TRNAinf-arch-3h.cm
usr/share/trnascan-se/models/TRNAinf-arch-5h.cm
usr/share/trnascan-se/models/TRNAinf-arch-SeC.cm
usr/share/trnascan-se/models/TRNAinf-arch-iso
usr/share/trnascan-se/models/TRNAinf-arch-iso.i1f
usr/share/trnascan-se/models/TRNAinf-arch-iso.i1i
usr/share/trnascan-se/models/TRNAinf-arch-iso.i1m
usr/share/trnascan-se/models/TRNAinf-arch-iso.i1p
usr/share/trnascan-se/models/TRNAinf-arch-ns.cm
usr/share/trnascan-se/models/TRNAinf-arch.cm
usr/share/trnascan-se/models/TRNAinf-bact-SeC.cm
usr/share/trnascan-se/models/TRNAinf-bact-iso
usr/share/trnascan-se/models/TRNAinf-bact-iso.i1f
usr/share/trnascan-se/models/TRNAinf-bact-iso.i1i
usr/share/trnascan-se/models/TRNAinf-bact-iso.i1m
usr/share/trnascan-se/models/TRNAinf-bact-iso.i1p
usr/share/trnascan-se/models/TRNAinf-bact-ns.cm
usr/share/trnascan-se/models/TRNAinf-bact.cm
usr/share/trnascan-se/models/TRNAinf-euk-SeC.cm
usr/share/trnascan-se/models/TRNAinf-euk-iso
usr/share/trnascan-se/models/TRNAinf-euk-iso.i1f
usr/share/trnascan-se/models/TRNAinf-euk-iso.i1i
usr/share/trnascan-se/models/TRNAinf-euk-iso.i1m
usr/share/trnascan-se/models/TRNAinf-euk-iso.i1p
usr/share/trnascan-se/models/TRNAinf-euk-ns.cm
usr/share/trnascan-se/models/TRNAinf-euk.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Ala.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Arg.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Asn.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Asp.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Cys.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Gln.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Glu.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Gly.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-His.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Ile.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-LeuTAA.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-LeuTAG.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Lys.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Met.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Phe.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Pro.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-SerGCT.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-SerTGA.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Thr.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Trp.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Tyr.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal-Val.cm
usr/share/trnascan-se/models/TRNAinf-mito-mammal.i1f
usr/share/trnascan-se/models/TRNAinf-mito-mammal.i1i
usr/share/trnascan-se/models/TRNAinf-mito-mammal.i1m
usr/share/trnascan-se/models/TRNAinf-mito-mammal.i1p
usr/share/trnascan-se/models/TRNAinf-mito-vert
usr/share/trnascan-se/models/TRNAinf-mito-vert-Ala.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Arg.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Asn.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Asp.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Cys-no-darm.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Cys.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Gln.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Glu.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Gly.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-His.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Ile.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-LeuTAA.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-LeuTAG.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Lys.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Met.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Phe.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Pro.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-SerGCT.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-SerTGA.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Thr.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Trp.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Tyr.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert-Val.cm
usr/share/trnascan-se/models/TRNAinf-mito-vert.i1f
usr/share/trnascan-se/models/TRNAinf-mito-vert.i1i
usr/share/trnascan-se/models/TRNAinf-mito-vert.i1m
usr/share/trnascan-se/models/TRNAinf-mito-vert.i1p
usr/share/trnascan-se/models/TRNAinf-ns.cm
usr/share/trnascan-se/models/TRNAinf.cm
usr/share/trnascan-se/models/Thaum-BHB-noncan.cm
usr/share/trnascan-se/tRNAscanSE/
usr/share/trnascan-se/tRNAscanSE/ArrayCMscanResults.pm
usr/share/trnascan-se/tRNAscanSE/ArraytRNA.pm
usr/share/trnascan-se/tRNAscanSE/CM.pm
usr/share/trnascan-se/tRNAscanSE/CMscanResultFile.pm
usr/share/trnascan-se/tRNAscanSE/Configuration.pm
usr/share/trnascan-se/tRNAscanSE/Eufind.pm
usr/share/trnascan-se/tRNAscanSE/FpScanResultFile.pm
usr/share/trnascan-se/tRNAscanSE/GeneticCode.pm
usr/share/trnascan-se/tRNAscanSE/IntResultFile.pm
usr/share/trnascan-se/tRNAscanSE/LogFile.pm
usr/share/trnascan-se/tRNAscanSE/MultiResultFile.pm
usr/share/trnascan-se/tRNAscanSE/Options.pm
usr/share/trnascan-se/tRNAscanSE/ResultFileReader.pm
usr/share/trnascan-se/tRNAscanSE/SS.pm
usr/share/trnascan-se/tRNAscanSE/ScanResult.pm
usr/share/trnascan-se/tRNAscanSE/Sequence.pm
usr/share/trnascan-se/tRNAscanSE/SprinzlAlign.pm
usr/share/trnascan-se/tRNAscanSE/SprinzlAlignResults.pm
usr/share/trnascan-se/tRNAscanSE/SprinzlPos.pm
usr/share/trnascan-se/tRNAscanSE/Stats.pm
usr/share/trnascan-se/tRNAscanSE/Tscan.pm
usr/share/trnascan-se/tRNAscanSE/Utils.pm
usr/share/trnascan-se/tRNAscanSE/tRNA.pm
