%FILES%
usr/
usr/lib/
usr/lib/R/
usr/lib/R/library/
usr/lib/R/library/VariantAnnotation/
usr/lib/R/library/VariantAnnotation/CITATION
usr/lib/R/library/VariantAnnotation/DESCRIPTION
usr/lib/R/library/VariantAnnotation/INDEX
usr/lib/R/library/VariantAnnotation/Meta/
usr/lib/R/library/VariantAnnotation/Meta/Rd.rds
usr/lib/R/library/VariantAnnotation/Meta/features.rds
usr/lib/R/library/VariantAnnotation/Meta/hsearch.rds
usr/lib/R/library/VariantAnnotation/Meta/links.rds
usr/lib/R/library/VariantAnnotation/Meta/nsInfo.rds
usr/lib/R/library/VariantAnnotation/Meta/package.rds
usr/lib/R/library/VariantAnnotation/Meta/vignette.rds
usr/lib/R/library/VariantAnnotation/NAMESPACE
usr/lib/R/library/VariantAnnotation/NEWS
usr/lib/R/library/VariantAnnotation/R/
usr/lib/R/library/VariantAnnotation/R/VariantAnnotation
usr/lib/R/library/VariantAnnotation/R/VariantAnnotation.rdb
usr/lib/R/library/VariantAnnotation/R/VariantAnnotation.rdx
usr/lib/R/library/VariantAnnotation/doc/
usr/lib/R/library/VariantAnnotation/doc/VariantAnnotation.R
usr/lib/R/library/VariantAnnotation/doc/VariantAnnotation.Rmd
usr/lib/R/library/VariantAnnotation/doc/VariantAnnotation.html
usr/lib/R/library/VariantAnnotation/doc/ensemblVEP.R
usr/lib/R/library/VariantAnnotation/doc/ensemblVEP.Rmd
usr/lib/R/library/VariantAnnotation/doc/ensemblVEP.html
usr/lib/R/library/VariantAnnotation/doc/filterVcf.R
usr/lib/R/library/VariantAnnotation/doc/filterVcf.Rmd
usr/lib/R/library/VariantAnnotation/doc/filterVcf.html
usr/lib/R/library/VariantAnnotation/doc/index.html
usr/lib/R/library/VariantAnnotation/extdata/
usr/lib/R/library/VariantAnnotation/extdata/chr22.vcf.gz
usr/lib/R/library/VariantAnnotation/extdata/chr22.vcf.gz.tbi
usr/lib/R/library/VariantAnnotation/extdata/chr7-sub.vcf.gz
usr/lib/R/library/VariantAnnotation/extdata/chr7-sub.vcf.gz.tbi
usr/lib/R/library/VariantAnnotation/extdata/ex2.vcf
usr/lib/R/library/VariantAnnotation/extdata/gl_chr1.vcf
usr/lib/R/library/VariantAnnotation/extdata/h1187-10k.vcf.gz
usr/lib/R/library/VariantAnnotation/extdata/h1187-10k.vcf.gz.tbi
usr/lib/R/library/VariantAnnotation/extdata/hapmap_exome_chr22.vcf.gz
usr/lib/R/library/VariantAnnotation/extdata/hapmap_exome_chr22.vcf.gz.tbi
usr/lib/R/library/VariantAnnotation/extdata/structural.vcf
usr/lib/R/library/VariantAnnotation/help/
usr/lib/R/library/VariantAnnotation/help/AnIndex
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usr/lib/R/library/VariantAnnotation/help/VariantAnnotation.rdx
usr/lib/R/library/VariantAnnotation/help/aliases.rds
usr/lib/R/library/VariantAnnotation/help/paths.rds
usr/lib/R/library/VariantAnnotation/html/
usr/lib/R/library/VariantAnnotation/html/00Index.html
usr/lib/R/library/VariantAnnotation/html/R.css
usr/lib/R/library/VariantAnnotation/libs/
usr/lib/R/library/VariantAnnotation/libs/VariantAnnotation.so
usr/lib/R/library/VariantAnnotation/scripts/
usr/lib/R/library/VariantAnnotation/scripts/test_Rplinkseq.R
usr/lib/R/library/VariantAnnotation/unitTests/
usr/lib/R/library/VariantAnnotation/unitTests/cases/
usr/lib/R/library/VariantAnnotation/unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/VarScan_header.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/banded_gvcf.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/buffer_realloc.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/ex1-seq1-90.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/expand.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/fewer-FORMAT-than-GENO.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/meta_header.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/missing-FORMAT-metadata-elt.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/mixedStructural.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/multiple_INFO_fields.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/negative_FORMAT_Number.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/no_FORMAT_column.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/no_GENO_row.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/no_INFO_header.vcf
usr/lib/R/library/VariantAnnotation/unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
usr/lib/R/library/VariantAnnotation/unitTests/test_SIFTandPolyPhen.R
usr/lib/R/library/VariantAnnotation/unitTests/test_ScanVcfParam-class.R
usr/lib/R/library/VariantAnnotation/unitTests/test_VCF-class.R
usr/lib/R/library/VariantAnnotation/unitTests/test_VRanges-class.R
usr/lib/R/library/VariantAnnotation/unitTests/test_expand-methods.R
usr/lib/R/library/VariantAnnotation/unitTests/test_filterVcf.R
usr/lib/R/library/VariantAnnotation/unitTests/test_genotypeToSnpMatrix.R
usr/lib/R/library/VariantAnnotation/unitTests/test_isSNV.R
usr/lib/R/library/VariantAnnotation/unitTests/test_locateVariants-methods.R
usr/lib/R/library/VariantAnnotation/unitTests/test_predictCoding-methods.R
usr/lib/R/library/VariantAnnotation/unitTests/test_readVcf-methods.R
usr/lib/R/library/VariantAnnotation/unitTests/test_scanVcf.R
usr/lib/R/library/VariantAnnotation/unitTests/test_snpSummary.R
usr/lib/R/library/VariantAnnotation/unitTests/test_summarizeVariants-methods.R
usr/lib/R/library/VariantAnnotation/unitTests/test_vcfFields.R
usr/lib/R/library/VariantAnnotation/unitTests/test_writeVcf-methods.R
